Home » Cupcake Recipes » Gluten Free Carrot Cake Cupcakes

Gluten Free Carrot Cake Cupcakes

This post may contain affiliate links to products I recommend. I receive a small commission at no cost to you if you make a purchase using my link.

These gluten free carrot cake cupcakes are super moist, lightly spiced and topped with a generous swirl of lemony cream cheese frosting.

A gluten free carrot cake cupcake with cream cheese frosting on a glass plate, with other cupcakes in the background.

These gluten free carrot cake cupcakes have been one of my favourite cupcake recipes for years, and I’m not sure why it’s taken me so long to share them.

Carrot cupcakes make a great gluten free dessert, morning tea, afternoon tea… heck, they’ve got carrots in them so I’m not going to pretend I haven’t eaten one for dinner in my chequered past. (And breakfast, too 🐰)

It’s actually pretty easy to make carrot cupcakes gluten free. Because they’re already a deliciously moist cupcake anyway, they adapt well to being gluten free.

Here’s What You’ll Love About This Recipe:


  • CLASSIC CARROT CAKE FLAVOUR Lightly spiced and with a touch of lemon zest.
  • SUPER MOIST – And they stay that way, thanks to the oil and carrots
  • EASY TO MAKE – You don’t need to be an experienced gluten free baker to make these.
  • SMOOTH CREAM CHEESE FROSTING – Thick enough to be piped in generous swirls on top of the cupcakes.
A carrot cupcake with a bite taken out of it, sitting on the peeled cupcake liner.

Scroll down to the recipe card for the full ingredients list and printable recipe, or keep reading for ingredient tips and process photos.

Ingredients

The gluten free carrot cake cupcake ingredients on a grey background with orange labels.

For the Gluten Free Carrot Cake Cupcakes

  • Gluten Free Flour – I use my favourite homemade gluten free flour blend, which is a combination of tapioca starch, potato starch and brown rice flour, however you can use your own favourite homemade or store-bought gluten-free flour blend. Keep in mind that the texture of the cupcakes will vary from mine if you use a different flour blend, as all blends use different flours and starches.
  • Xanthan Gum – This helps to hold the cupcakes together and stop them from crumbling. If you use a gluten free flour blend that contains a gum ingredient (check the ingredients list), then you can omit the xanthan gum from the recipe.
  • Baking Soda
  • Spices – I use mixed spice, which is a common spice blend used in baking in New Zealand, however, you can use a bought or homemade pumpkin pie spice instead, as they are so similar. And if you don’t have either? Just use ground cinnamon instead. Make sure your spices are gluten free.
  • Eggs
  • Brown Sugar
  • Vegetable Oil – Use any neutral-flavoured vegetable oil. I used rice bran oil, but grapeseed, canola or even a very light olive oil will also work.
  • Carrots – You’ll need around 3-4 medium carrots for this recipe. We’re weighing the grated carrot to make sure we have the right amount. Make sure you use fresh carrots for the moistest cupcakes.
  • Walnuts – These are optional, but I’m Team Walnut when it comes to carrot cupcakes. If you’re not a walnut fan, you can leave them out, or if you prefer, you can use pecans or raisins instead.
  • Lemon – I love lemon in these cupcakes; however, if you don’t have any on hand, then you can leave it out.

Optional – If you enjoy raisins in your carrot cupcakes, you can add some in place of come of the walnuts.

The cream cheese frosting ingredients on a grey background with orange labels.

For the Cream Cheese Frosting

  • Unsalted Butter – Unsalted butter is best for frosting, so you can control the added salt and prevent it from being too salty.
  • Cream Cheese – You need to use a block of full-fat cream cheese for this – tub cream cheese and spreadable cream cheese do not work in frosting. Low-fat cream cheese also won’t work. I use good old Philadelphia cream cheese blocks.
  • Icing Sugar – Also known as confectioner’s sugar or powdered sugar.
  • Lemon – I love lemon in cream cheese frosting, but if you don’t, you can use a teaspoon of vanilla extract instead.
  • Salt – We’re just adding a little pinch of salt to the frosting to help cut the sweetness.

How to Make Gluten Free Carrot Cupcakes

Start by prepping the carrots and walnuts. The carrots get peeled and grated, either using a standard box grater, or a food processor (or stand mixer) with a shredder attachment. I like to use both the coarse and finer side of the grater so there’s a combination of textures, but you can do whatever you like.

The walnuts need to be chopped, again, the size is up to you.

Shredded carrots on a white chopping board, next to a pyramid box grater.
Chopped walnuts on a white chopping board, next to a large chef's knife with a black handle.

The cake batter is straightforward to make. The eggs, brown sugar, oil and lemon zest are beaten together until thick and creamy. Then the sifted dry ingredients are mixed in.

The beaten wet ingredients in a glass mixer bowl, with the dry ingredients in small bowls, on a grey background.
The mixed cake batter.

The shredded carrots get stirred in, followed by the chopped walnuts.

The shredded carrots being mixed into the cupcake batter.
The chopped walnuts being mixed into the cupcake batter.

Then the batter gets spooned into cupcake papers. This recipe makes 18 cupcakes, so you’ll need two (well, one and a half) muffin pans.

The cupcake batter in a 12-hole muffin pan lined with white cupcake liners.
The baked cupcakes in the muffin pan.

Once they’re cool, you can top them with a generous swirl of cream cheese frosting. This is a simple lemon cream cheese frosting, but you can flavour the frosting with vanilla, a few spoonfuls of caramel sauce or maple syrup instead if you prefer.

A close up of the cream cheese frosting in a glass bowl.
A close up of a spoonful of the cream cheese frosting.

The tall swirl of frosting really gives these cupcakes that classic bakery-style look, but you can also do a smaller swirl, or just spread the frosting on with a spoon or palette knife.

A flat-lay showing several carrot cupcakes, some iced and some uniced, with scattered walnuts and a spatula spread with cream cheese icing, on a grey marble background.

I hope these gluten free carrot cake cupcakes become as much of a favourite in your family as they are in mine 🧡

A gluten free carrot cake cupcake topped with a tall swirl of cream cheese frosting, on a glass plate against a peach terrazzo background.

Gluten Free Carrot Cake Cupcakes

These bakery style gluten free carrot cake cupcakes are super moist, lightly spiced and topped with a generous swirl of lemony cream cheese frosting.
4.4 from 5 votes
Print Recipe Pin Recipe Save
Prep Time: 20 minutes
Cook Time: 20 minutes
Total Time: 36 minutes
Cuisine: American
Category: Cupcake Recipes, Gluten Free
Makes: 18 cupcakes

Ingredients

For the Cupcakes

  • 450 g gluten free flour
  • 1 ¼ teaspoons baking soda
  • 1 teaspoon xanthan gum see notes
  • 1 teaspoon mixed spice or pumpkin pie spice
  • 400 g grated carrot approx. 3-4 medium-sized carrots
  • 100 g walnuts optional
  • 4 large eggs
  • 350 g brown sugar
  • 1 ¼ cups vegetable oil (310ml or 260g) use any neutral flavoured oil
  • 1 teaspoon lemon zest

For the Cream Cheese Frosting

  • 250 g unsalted butter at room temperature
  • 1 teaspoon lemon zest
  • ¼ teaspoon table salt
  • 160 g full-fat cream cheese at room temperature
  • 550 g icing sugar aka. powdered sugar or confectioner's sugar
  • 1 teaspoon lemon juice

Instructions

Make the cupcakes

  • Heat oven to 160°C (320°F). Line one and a half standard muffin pans with paper cupcake liners (18 holes). If you don't have two muffin pans, bake the first 12 cupcakes, let them cool slightly and remove them from the pans, then repeat for the remaining batter.
  • Sift together the gluten free flour, baking soda, xanthan gum and mixed spice or pumpkin pie spice into a bowl and whisk to combine, set aside.
  • Peel and grate the carrots, and weigh out 400g.
  • Chop the walnuts.
  • In the bowl of a stand mixer fitted with the paddle attachment, or using a large bowl and a handheld electric mixer, beat together the eggs, brown sugar, oil and lemon zest until thick and creamy – around 3-4 minutes.
  • Add in the dry ingredients in 2-3 additions, mixing well and scraping down the sides of the bowl. Stir in the grated carrots and chopped walnuts.
  • Spoon the mixture into the cupcake papers. They should be around ¾ full, be careful not to overfill or they will overflow.
  • Bake the cupcakes for 20-25 minutes. They should be lightly golden on top, and a skewer inserted into the middle should come out clean.
  • Allow to cool in the pans for a few minutes, then remove and place on a wire rack to cool completely before icing.

Make the Frosting

  • In the bowl of a stand mixer fitted with the paddle attachment or in a large bowl with a handheld mixer, beat the butter together with the lemon zest and salt until pale and creamy, around 4-5 minutes.
  • Add the cream cheese, and beat for another 2-3 minutes until well combined and creamy.
  • On low speed, add in the icing sugar in 2-3 additions, scraping down the sides of the bowl a couple of times. Add the lemon juice and beat on low speed for 1-2 minutes until creamy and smooth.
  • Chill the frosting for 10-15 minutes to firm up slightly.
    Transfer to a piping bag fitted with a large star or round tip and pipe swirls of frosting onto each cupcake.
    Don't want to pipe? Just spread the frosting onto the cupcakes using a spoon or palette knife.

Storing the Cupcakes

  • Unfrosted cupcakes can be stored in an airtight container at room temperature for 2-3 days, or frozen for 2-3 months. Wrap the cooled cupcakes in plastic wrap and place into an airtight container or resealable plastic bag before freezing.
    Frosted cupcakes should be stored in an airtight container in the refrigerator. They will keep for 3-4 days. Bring to room temperature before eating, to soften the frosting.

Notes

  • Gluten Free Flour – I use my favourite homemade gluten free flour blend in this recipe, however you can use your own favourite homemade or store bought gluten free flour blend.
  • Xanthan Gum – If using a gluten free flour blend that contains a gum ingredient, you can omit the xanthan gum from the recipe. 
    Spice – I use mixed spice, which is a common spice blend used in baking in New Zealand, however, you can use a bought or homemade pumpkin pie spice or plain cinnamon instead.
  • Walnuts – These are optional, you can leave them out or replace them with pecans or raisins instead.
  • Cream Cheese – You need to use a block of full-fat cream cheese for the frosting – spreadable cream cheese and low-fat cream cheese do not work well in frostings.
Serving: 1cupcake | Calories: 571kcal | Carbohydrates: 69g | Protein: 6g | Fat: 32g | Saturated Fat: 10g | Polyunsaturated Fat: 12g | Monounsaturated Fat: 7g | Trans Fat: 1g | Cholesterol: 72mg | Sodium: 214mg | Potassium: 167mg | Fiber: 3g | Sugar: 51g | Vitamin A: 4126IU | Vitamin C: 2mg | Calcium: 86mg | Iron: 1mg

Nutritional Disclaimer: Any nutritional information provided is a computer generated estimate and is intended as a guide only.

Enjoyed this recipe?Tag @sweetness.and.bite on Instagram, and hashtag #sweetnessandbite so we can see it! ❤

More Gluten Free Recipes You May Like…